scripts: fix tools override

The tools found by the new autostuff configure can contain arguments,
for example: grep -E

This needs separating the paths set for the Makfile from the paths
set for the scripts.

Signed-off-by: "Yann E. MORIN" <yann.morin.1998@anciens.enib.fr>

 reporter_name="Remy Bohmer"

 reporter_url="linux@bohmer.net"

 reporter_comment="Example for building a toolchain for m68000 bare metal targets"